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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1056347 chr6:26527524 G/C ZNF322B chr9:99957633-99961910:- 0.45 7.96 2.01E-14 Box Plot
BLCA rs1056667 chr6:26510564 T/C ZNF322B chr9:99957633-99961910:- 0.45 7.92 2.6E-14 Box Plot
BLCA rs1056668 chr6:26510605 C/T ZNF322B chr9:99957633-99961910:- 0.42 7.39 9.24E-13 Box Plot
BLCA rs10591465 chr5:176557460 CAT/C LOC388955 chr2:63849182-63850159:- -0.73 -13.51 2.81E-34 Box Plot
BLCA rs1061047 chr12:13066220 C/T RPL39 chrX:118920467-118925606:- 0.34 6.97 1.37E-11 Box Plot
BLCA rs1063674 chr18:77288063 C/T C18orf54 chr18:51884287-51911588:+ -0.66 -6.1 2.63E-9 Box Plot
BLCA rs10715334 chr7:140157596 GA/G LOC441455 chr9:99488103-99489749:+ 0.49 6.1 2.65E-9 Box Plot
BLCA rs10717064 chr15:64082820 AT/A VCX chrX:7810303-7812184:+ 0.34 5.96 5.83E-9 Box Plot
BLCA rs10738198 chr9:11011600 A/G KIAA0020 chr9:2720469-2844241:- 0.69 7.09 6.38E-12 Box Plot
BLCA rs10738198 chr9:11011600 A/G PSIP1 chr9:15464064-15511017:- 0.56 6.36 5.85E-10 Box Plot
BLCA rs1073830 chr12:106279161 T/A RASL10A chr22:29708922-29715668:- 0.27 5.98 5.22E-9 Box Plot
BLCA rs10741782 chr11:19613111 C/T C11orf58 chr11:16634679-16778428:+ 0.66 6.26 1.04E-9 Box Plot
BLCA rs10741782 chr11:19613111 C/T EIF4G2 chr11:10818597-10830657:- 0.65 6.19 1.57E-9 Box Plot
BLCA rs10741782 chr11:19613111 C/T PSMA1 chr11:14526420-14665181:- 0.69 6.09 2.67E-9 Box Plot
BLCA rs10741782 chr11:19613111 C/T TSG101 chr11:18489883-18548779:- 0.74 5.95 5.94E-9 Box Plot